Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015789435.1_cds_XP_016496294.1_983
CDS Infomation

[gene=LOC107815239] [db_xref=GeneID:107815239] [protein=serine/threonine-protein kinase EDR1-like isoform X2] [protein_id=XP_016496294.1] [location=join(54899..55147,55419..55622,56618..56809,57031..57284,58719..58814,61072..61158,61767..61872,65319..65607,66786..66909,67057..67076,67306..67462,68775..69063,69176..69248,69450..69532)] [gbkey=CDS]
Sequence

ATGGAGAAGAGAGGAAATGATACGCGGTCAGCAGAGGTTCTGCCTTCCGATGCTCCTTGG
TGGCCAGCAGATATTTCTGACAAACTACAGTTGATCACTCTGGAATCTTCAGAAGATAAA
ACAAACTCTACTGTATTGAGCGGCAAGCAGGAGCCAGAGGGTTTAGCATCAAAGAGAGCG
TCTCAGATTCTGTGGGACACGGGGGAACTTGCAGAACTTATTCCTGATGGTTTCTACTTT
GTTATTCCAGAAAGAAGATTCAAGGAACATTTTGATACTATTCCATCTTTGGATGACCTT
TATGCTTTGGACGCAGAGGGTCTTCGGCCTAATGTTATTCTTGTCAATCTGCATAAAGAT
AAGAAGCTTTCCATGTTAAAACAGCTGACCCTCACTTTAGTGAAAGGATTGCATTCTACT
CCAGCTGTAGTGGTGAAGAAGATTGCAGGGTTGGTTTGTGATTTTTATAAGCATCCAAAG
TACAAGTCAACTCATGTGAGTGGTACACTTGAGGAGGTCTCACATGCTTTGGGCAGTCAA
GGAATCCATATGCTCTGCCAAATAAAGGATGGTTCCTGCCATTCTCGAGCAATCTTATTC
AAAGTTCTTGCTGACACTGTGGGCCTGGAGTGCAAGCTGATTGTGGGTTTCCCAAGAGGA
GGAGCGCTGGAGCGCACAGACTCGTCTAAGCACATCTGTGTGACAGTCATTCTGGATTCG
GTGGAACTACTGGTTGACCTTATGCATTATCCCGGAAAGCTGTTTCCCTGTTCAACAAAG
CAGCGAAGTCGCTCTCATTTCTTTGGTGAGAGTGATTCTATAGAAACTGATTCATATAAC
TCACCGATGGATCCCATTAGCCCTACCTGTTTCAGTTCCGACTATAGTGGCACTGGAAGT
CCAGAGCATCCTTTCTTCCGAGGACCTGGGAGATCCATTCTTGGTGGTCGCGCACTTTCT
TTCAAGGACTGCACCTATGATGTTACTTCTTCAAGGTCTGCTGGTGCATCACCTTTACAC
ACTCGTAGAAGAAGACGAAGATCCATTAGCATGATTCCGGAGATTGGTGATGACATTGTA
AGGGTTGTTCGGGAAATGAATGCATCTATGAAGAAAAATCATCTATCAGGGGGACAAGCA
ACATTTGATTTGTCTACAAGGAAAAAGGAAGATAATTCTGGTCGTCAAGTGCTGAATTTC
CATCCAGATGACCCAAATACAGGAAATGGTGAAAAAGGTCAAGCACAGCATTTTCATGGA
AAGTGTTTGGCATCTGACAAAGCAATCTCCCTGCCTTCATCCCCGCACCGGACCTATGGT
AGAGGCAATGCAGCAGGAATTTTTGGCAGTCCTGATATGATGTCAAGATTGGAAAAAGTG
ATAGAATCTTCAAGGATCCTCAACAAACCATTGTTACCATTTGATGAATGGAACATTGAT
TTCTCTGAAATCACCATTGGAGCACGTGTTGGAATTGGGTTTTTTGGAGAAGTCTTTCGC
TGTATTTGGAATGGAACAGAGGTTGCAGTTAAGGTTTTCCTAGAACAAGACTTGAACGAA
GAAAACATTGAAGATTTTGCCAATGAAATATCCATCCTGAGCCGCATTCGCCACCCAAAT
GTAATCTTGTTCCTCGGTGCTTGCACTACTCCCCCTCGTTTATCCGTGATTACCGAATTC
ATGGAGATGGGATCCCTGTATCATCTGATCCATGTAAGTGGACAGAAGAATAGCCTCAGC
TGGCAAAGGAGATTGAAAATGCTTTGCGATATATGCAGGGGGCTGCTGTGTATACATAGG
ATGAAAATTGTGCATCGTGATCTAAAGAGTGGAAACTGCCTTGTAAATAAACACTACAAA
GTCAAGATCTGTGATTTTGGACTGTCGCGGTTACTGATTTCAACGCCCATGCAAGATTCT
TCCTCAGCAGGTACACCGGAATGGATGGCCCCAGAGCTTATTCGTAATGAACCTTTCACC
GAAAAATGCGACATTTTTAGTCTTGGGGTCATAATATGGGAACTATTCACACTCAAAAAA
CCATGGGAAGGTGTTCCATCTATCCAGGTCGTGTACGCTGTTGCTAATGATGGAAAACGG
CTAGAAATTCCTGAAGGTCCTCTAGGAAAGCTAATTTCAGATTGCTGGGCAGAACCAGAT
GAACGGCCTAGTTGTGAGGAAATCTTATTACGGCTACAAGAATGTAGGTCTTCTGCTAGT
TGA

Peptide Sequence

PEP ID

XP_016496294.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase EDR1-like isoform X2 [Nicotiana tabacum]
Sequence

MEKRGNDTRSAEVLPSDAPWWPADISDKLQLITLESSEDKTNSTVLSGKQEPEGLASKRA
SQILWDTGELAELIPDGFYFVIPERRFKEHFDTIPSLDDLYALDAEGLRPNVILVNLHKD
KKLSMLKQLTLTLVKGLHSTPAVVVKKIAGLVCDFYKHPKYKSTHVSGTLEEVSHALGSQ
GIHMLCQIKDGSCHSRAILFKVLADTVGLECKLIVGFPRGGALERTDSSKHICVTVILDS
VELLVDLMHYPGKLFPCSTKQRSRSHFFGESDSIETDSYNSPMDPISPTCFSSDYSGTGS
PEHPFFRGPGRSILGGRALSFKDCTYDVTSSRSAGASPLHTRRRRRRSISMIPEIGDDIV
RVVREMNASMKKNHLSGGQATFDLSTRKKEDNSGRQVLNFHPDDPNTGNGEKGQAQHFHG
KCLASDKAISLPSSPHRTYGRGNAAGIFGSPDMMSRLEKVIESSRILNKPLLPFDEWNID
FSEITIGARVGIGFFGEVFRCIWNGTEVAVKVFLEQDLNEENIEDFANEISILSRIRHPN
VILFLGACTTPPRLSVITEFMEMGSLYHLIHVSGQKNSLSWQRRLKMLCDICRGLLCIHR
MKIVHRDLKSGNCLVNKHYKVKICDFGLSRLLISTPMQDSSSAGTPEWMAPELIRNEPFT
EKCDIFSLGVIIWELFTLKKPWEGVPSIQVVYAVANDGKRLEIPEGPLGKLISDCWAEPD
ERPSCEEILLRLQECRSSAS

Transcript Sequence

Gene sequence data has not been registered.